8 / 2026-01-23 13:38:55

Deciphering the Sperm RNA Code of Aging with PANDORA-seq

Sperm Epigenetics,Small RNA,Paternal Age Effect,Epigenetic Inheritance

前沿论坛 > 生命组学技术

Sperm aging impacts male fertility and offspring health, highlighting the need for reliable aging biomarkers to guide reproductive decisions. However, the molecular determinants of sperm fitness during aging remain ill-defined. Here, we profiled sperm small non-coding RNAs (sncRNAs) using PANDORA-seq, which overcomes RNA modification–induced detection bias to capture previously undetectable sncRNA species associated with mouse and human spermatocytes throughout the lifespan. We identified an “aging cliff” in mouse sperm RNA profiles—a sharp age-specific transition marked by significant shifts in genomic and mitochondrial tRNA-derived small RNAs (tsRNAs) and rRNA-derived small RNAs (rsRNAs). Notably, rsRNAs in sperm heads exhibited a transformative length shift, with longer rsRNAs increasing and shorter ones decreasing with age, suggesting altered biogenesis or processing with age. Remarkably, this sperm head-specific shift in rsRNA length was consistently observed in two independent human aging cohorts. Moreover, transfecting a combination of tsRNAs and rsRNAs resembling the RNA species in aged sperm was able to induce transcriptomic changes in mouse embryonic stem cells, impacting metabolism and neurodegeneration pathways, mirroring the phenotypes observed in offspring fathered by aged sperm. These findings provide novel insights into longitudinal small dynamics of sncRNAs during sperm aging, highlighting a rsRNA length shift conserved in mice and humans.